BESC knowledgebase public portal

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BESC knowledgebase public portal†

UNLABELLED The BioEnergy Science Center (BESC) is undertaking large experimental campaigns to understand the biosynthesis and biodegradation of biomass and to develop biofuel solutions. BESC is generating large volumes of diverse data, including genome sequences, omics data and assay results. The purpose of the BESC Knowledgebase is to serve as a centralized repository for experimentally genera...

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Lori-Anne Williams, BESc

1 From the Imaging Division, Lawson Health Research Institute, London, Ontario, Canada (L.A.W., N.G., P.A.P., D.S.L., V.K.H., R.T.T.); Department of Medical Biophysics, University of Western Ontario, London, Ontario, Canada (L.A.W., N.G., P.A.P., R.T.T.); Departments of Nuclear Medicine (L.A.W.), Radiology (N.G., R.T.T.), and Maternal and Newborn Health (D.S.L., V.K.H.), St Joseph’s Health Care...

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Documentation for BESC KB Genome Resequencing toolkit

This kit was developed for BESC genome resequencing projects. The target for resequencing is usually the genome of a strain, which is further referred to as the mutant strain, or M strain, with a practically important phenotype evolved by an adaptation of a wild type strain. This phenotype is absent in the wild type strain, or WT strain, with a completely sequenced genome, which is used as the ...

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Standard Biological Parts Knowledgebase

We have created the Knowledgebase of Standard Biological Parts (SBPkb) as a publically accessible Semantic Web resource for synthetic biology (sbolstandard.org). The SBPkb allows researchers to query and retrieve standard biological parts for research and use in synthetic biology. Its initial version includes all of the information about parts stored in the Registry of Standard Biological Parts...

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Spatially-Augmented Knowledgebase

As an increasing number of applications on the web contain some elements of spatial data, there is a need to efficiently integrate Semantic Web technologies and spatial data processing. This paper describes a prototype system for storing spatial data and Semantic Web data together in a SPatiallyAUgmented Knowledgebase (SPAUK) without sacrificing query efficiency. The goals are motivated through...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2012

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/bts016